Archived CFMRI Docs

ARCHIVED - Multiband Data Management

• Navigating & Interacting with Multiband Data Effectively at CFMRI
  • Automated Multiband Reconstruction Process
  • Basic Description of the Multiband Reconstruction Process
  • What You Need to Know as a Scanner Operator
  • Instructions for Viewing and Pulling Data from AWS
    • To view available files from CFMRI AWS buckets
    • To copy a file to your current directory
    • To search specifically for your scan files
    • To copy all your reconstructed nii.gz files
  • Auto-Recon Failures
    • Manually reconstructing your data on fmri1, fmri2, or fmri3
  • Z-Stretched Reconstructions
    • Why does this happen?
    • What does it look like?
    • How do I fix it?

ARCHIVED - Imaging Protocols

• ARCHIVED - CFMRI GE MR750 Imaging Protocol Documentation
  • ARCHIVED - CFMRI Multiband Protocol #1
    • Protocol Location and Receiver Coil Info
    • Pre-Scan Preparation
    • Data Acquisition: EPI & Topup Distortion Correction
    • Data Acquisition: Diffusion Tensor Imaging (DTI)
    • DTI Distortion Correction Acquisition Option #1:
    • DTI Distortion Correction Acquisition Option #2:
  • ARCHIVED - CFMRI Multiband Protocol #2
    • Protocol Location and Receiver Coil Info
    • Pre-Scan Preparation
    • Data Acquisition: EPI & Topup Distortion Correction